@article {83035,
	title = {Zooplankton invasion on a grand scale: insights from a 20-yr time series across 38 Northeast Pacific estuaries},
	journal = {Ecosphere},
	volume = {11},
	number = {5},
	year = {2020},
	note = {This paper summarizes the results of over 20 years of observations of zooplankton invasions of Pacific Northwest estuaries, from 2006-2016. {\textquotedblleft}Our results show that some estuaries across the region are invaded by multiple zooplankton species and that the geographic extent of invasion is far greater than previously reported for at least five species of copepods . . . We propose that the geographic distribution of these invaders is strongly constrained by geomorphic characteristics that define the salinity and mixing regimes in these estuaries, reflecting the strong role that physical forces play in structuring estuarine zooplankton communities.{\textquotedblright} (from the Abstract) This is an open-access publication.},
	month = {2020, May},
	pages = {e03040},
	keywords = {aquatic invertebrates, Chetco River, Coos River, copepods, Coquille River, estuarine dynamics, habitats, introduced species, Rogue River, salinity, Siuslaw River, Tillamook River, Umpqua River, water temperature, Yaquina River, zooplankton},
	doi = {https://doi.org/10.1002/ecs2.3040 },
	url = {https://esajournals.onlinelibrary.wiley.com/doi/epdf/10.1002/ecs2.3040 },
	author = {Dexter, Eric and Bollens, Stephen M. and Cordell, Jeffery and Rollwagen-Bollens, Gretchen}
}
@article {26371,
	title = {Hydrogeomorphic (HGM) Assessment Guidebook for Tidal Wetlands of the Oregon Coast, Part 1: Rapid Assessment Method},
	year = {2006},
	note = {"Produced for the Coos Watershed Association, Oregon Department of State Lands, and U.S.E.P.A.-Region 10." Outlines a method for assessing the conditions of Oregon coastal wetlands and estuaries. Short bibliography, with a more extensive bibliography in part 2 of this handbook. Many color photographs of Oregon wetlands.},
	pages = {85 p.},
	institution = {Coos Watershed Association},
	address = {Charleston, Or.},
	keywords = {aquatic invertebrates, aquatic vegetation, birds, estuarine dynamics, flooding, general, human impacts, salinity, sediments, species list, statistics, terrestrial mammals, tidal processes, water quality, wetland delineation, wetland vegetation},
	url = {https://digital.osl.state.or.us/islandora/object/osl\%3A14026},
	author = {Adamus, Paul R.}
}
@article {26261,
	title = {Hydrogeomorphic (HGM) Assessment Guidebook for Tidal Wetlands of the Oregon Coast - Part 2:  Science Review and Data Analysis for Tidal Wetlands of the Oregon Coast},
	year = {2005},
	note = {"This document describes the development and technical basis for the hydrogeomorphic (HGM) method for assessing tidal wetlands of the Oregon coast... Drawing from approximately 500 published sources and databases, this document reviews scientific literature on tidal wetland functions, especially as it pertains to the presented HGM method and the Pacific Northwest. Data are summarized on dozens of variables that were measured or estimated in 120 tidal wetlands during summer 2003." (From Summary, p.i.)  Includes details about the method and scoring.  Has bibliography for all three volumes.},
	pages = {216 p. .},
	institution = {Oregon Dept. of State Lands },
	address = {Salem, Or.},
	keywords = {aquatic invertebrates, aquatic vegetation, birds, estuarine dynamics, flooding, human impacts, salinity, sediments, species list, statistics, terrestrial mammals, tidal processes, water quality, wetland delineation, wetland vegetation},
	url = {https://digital.osl.state.or.us/islandora/object/osl\%3A80477},
	author = {Adamus, Paul R.}
}
@article {26266,
	title = {Hydrogeomorphic (HGM) Assessment Guidebook for Tidal Wetlands of the Oregon Coast - Part 3 Wetland Profiles of Oregon{\textquoteright}s Coastal Watersheds and Estuaries},
	year = {2005},
	note = {Bibliography is with the 2nd volume of this handbook, "Oregon Tidal Wetland Functions Literature Review \& Data." This volume summarizes the state of tidal and non-tidal wetlands on the Oregon Coast. Looks at potential stressors, water quality. Gives detailed descriptions of 16 wetlands in the Umpqua River Estuary. The wetlands were assessed in 2003. Tidal wetlands make up about16\% of the Umpqua River Estuary.  },
	pages = {89 p.},
	institution = {Oregon Dept. of State Lands},
	address = {Salem, Or.},
	keywords = {aquatic invertebrates, aquatic vegetation, Barretts Landing, birds, Bolon Island, Dean Creek, East Gardiner, estuarine dynamics, flooding, Fred Wahl Marine: Scholfield Slough, human impacts, salinity, sediments, species list, statistics, Steamboat Island, terrestrial mammals, The Point, tidal processes, Umpqua River estuary, water quality, wetland delineation, wetland vegetation},
	url = {https://digital.osl.state.or.us/islandora/object/osl\%3A80478},
	author = {Adamus, Paul R. and Larsen, Jennifer and Scranton, Russell}
}
@proceedings {25626,
	volume = {no. 11},
	year = {1998},
	note = {Held August 13-14, 1996.},
	publisher = {NOAA Coastal Ocean Office},
	address = {Troutdale, Oregon},
	keywords = {biological, chinook salmon=Oncorhynchus tshawytscha, chum salmon=Oncorhynchus keta, coastal upwelling, Columbia River estuary, community ecology, Coos River estuary, ecological succession, ecological values, ecosystem modeling, environmental policy and law, estuarine dynamics, general, general ecosystem description, history, human impacts, land use, Pacific salmonids=Oncorhynchus species, physical, physical modifications, population biology, steelhead=Oncorhynchus mykiss (rainbow trout=Salmo gairdneri), Yaquina Bay, Yaquina River, Yaquina River Basin},
	url = {http://www.cop.noaa.gov/pubs/das/das11.pdf },
	author = {McMurray, Gregory R. and Robert J Bailey}
}
@proceedings {83283,
	title = {Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop},
	volume = {no. 11},
	year = {1998},
	publisher = {NOAA Coastal Ocean Office},
	address = {Troutdale, Oregon},
	keywords = {biological, chinook salmon=Oncorhynchus tshawytscha, chum salmon=Oncorhynchus keta, coastal upwelling, Columbia River estuary, community ecology, Coos River estuary, ecological succession, ecological values, ecosystem modeling, environmental policy and law, estuarine dynamics, general, general ecosystem description, historical, human impacts, land use, Pacific salmonids=Oncorhynchus species, physical, physical modifications, population biology, steelhead=Oncorhynchus mykiss (rainbow trout=Salmo gairdneri), Yaquina Bay, Yaquina River, Yaquina River Basin},
	url = {https://tinyurl.com/4ecrerzb},
	author = {McMurray, Gregory R. and Bailey, Robert J.}
}
@article {24881,
	title = {Physical and hydrologic characteristics.  The Oregon estuaries},
	volume = {no.1},
	year = {1988},
	note = {Good basic physical descriptions of Oregon estuaries. },
	month = {November_1988},
	address = {Rockville, MD},
	keywords = {Alsea River estuary, Columbia River estuary, Coos River estuary, estuarine dynamics, hydrology, Nehalem River estuary, Netarts estuary, physical, Rogue River estuary, Siletz River estuary, Siuslaw River estuary, Tillamook estuary, Umpqua River estuary, Yaquina Bay, Yaquina River Basin},
	url = {https://repository.library.noaa.gov/view/noaa/2853},
	author = {Shirzad, Farzad F. and United States. Ocean Assessments Division. Strategic Assessment Branch,}
}
@book {24656,
	title = {Disposal of Seafood Waste to Enhance Recreational Fisheries on the Umpqua River Estuary},
	year = {1984},
	note = {ODFW Progress Reports. In 1981, the Douglas County Dept. of Public Works banned dumping of seafood processing waste in the county landfill. The processing plants began negotiations to discharge their wastes into the Umpqua Estuary.  This study, began in Sept. 1982, was intended to learn what happened to discharged wastes, their impact on water quality and the estuary{\textquoteright}s life, see if seafood wastes could enhance production of fish and shellfish, and set criteria for locating and timing waste disposal into the bay.  Maps.  Includes list of species seined between Cornwall Point and Salmon Harbor west basin entrance.},
	month = {1984},
	pages = {31 p.},
	publisher = {Fish Division, Oregon Dept. of Fish and Wildlife},
	organization = {Fish Division, Oregon Dept. of Fish and Wildlife},
	address = {Portland, Or.},
	keywords = {estuarine dynamics, seafood processing, Shiner perch = Cymatogaster aggregate, species list, tidal currents, Umpqua River estuary, waste disposal, water pollution, water quality},
	url = {https://odfw-static.forestry.oregonstate.edu/freshwater/inventory/pdffiles/Umpqua\%20Estuary\%20Disposal\%20of\%20Seafood\%20Waste.pdf},
	author = {Miller, B. A.}
}
@book {24621,
	title = {The ecology of estuarine channels of the Pacific Northwest coast: a community profile},
	series = {FWB/OBS},
	volume = {no.83/05},
	year = {1983},
	note = {Overview of assemblages in estuarine channels in this region:  benthic fauna, epifauna, zooplankton, fishes, birds, mammals. Illustrations, charts and maps. In Google Books.},
	pages = {101 p.},
	publisher = {U.S. Department of the Interior.  Fish and Wildlife Service},
	organization = {U.S. Department of the Interior.  Fish and Wildlife Service},
	chapter = {101 pp.},
	address = {Washington, D.C.},
	keywords = {aquatic invertebrates, aquatic mammals, aquatic vegetation, birds, estuarine dynamics, fishes, general ecosystem description, habitats},
	url = {https://tinyurl.com/cpxvm6vf},
	author = {Simenstad, Charles A. and U.S. National Coastal Ecosystems Team,}
}
@book {24351,
	title = {Habitat classification and inventory methods for the management of Oregon estuaries.  Final report: estuary inventory project},
	series = {Estuary Inventory Report},
	number = {v. 1},
	year = {1979},
	note = {"This volume is divided into two parts. Part 1 discusses estuary and estuarine habitat classification as a basis for resource planning. A hierarchical classification system is presented and suggested as an appropriate system for Oregon estuaries. Part 2 of the report suggests guidelines for estuarine resource inventories, including a list of specific categories of data and methods of data collection most needed for planning. The guidelines are also presented as a checklist for identifying research needs for estuaries where these data are not currently available. Volume 2 in this series consists of several reports summarizing current physical and biological data and describing the habitats for selected Oregon estuaries. Specific management and research recommendations are discussed in each estuary report. " (from the Abstract) v.2, no.5 in this series is the Natural resources of Umpqua estuary report.},
	month = {1979},
	pages = {109 p.},
	publisher = {Oregon Department of Fish and Wildlife},
	organization = {Oregon Department of Fish and Wildlife},
	address = {Portland, Or.},
	keywords = {aquatic vegetation, estuaries, estuarine dynamics, general ecosystem description, hydrography, hydrology, nitrogen, salinity, sediments, water quality, wetland delineation},
	url = {https://ir.library.oregonstate.edu/concern/defaults/fx719s684},
	author = {Bottom, Daniel L. and Kreag, Becky and Ratti, Frank and Roye, Cyndi and Starr, Rick and Oregon. Dept. of Fish and Wildlife. Research and Development Section, and Oregon Land Conservation and Development Commission,}
}
@book {24411,
	title = {Natural resources of Umpqua Estuary},
	series = {Estuary Inventory Report},
	volume = {2},
	number = {5},
	year = {1979},
	note = {Notes backeddies and potential pollution problems.  Nice micro-habitat maps of marshes on The Point Island and Goose Island.},
	month = {1979},
	pages = {57 p.},
	publisher = {Oregon Dept. of Fish and Wildlife},
	organization = {Oregon Dept. of Fish and Wildlife},
	address = {Portland, Or.},
	keywords = {aquatic vegetation, birds, estuarine dynamics, fishes, general ecosystem description, Goose Island, human impacts, hydrology, industrial development, invertebrates, map, natural resource management, sediments, species list, terrestrial mammals, The Point Island, Umpqua River estuary, wetland vegetation},
	url = {https://ir.library.oregonstate.edu/concern/defaults/pg15bm21n},
	author = {Ratti, Frank D. (Frank Douglas)}
}
@book {23906,
	title = {General Planning Methodology for Oregon{\textquoteright}s Estuarine Natural Resources},
	year = {1973},
	note = {{\textquotedblleft}Fundamental concepts and concerns for comprehensive environmental planning are examined.  It is reasoned that meaningful planning must effectively deal with the inevitable ignorance concerning man and the ecological systems of which he is an inseparable part.  A {\textquoteleft}diversity approach{\textquoteright} is presented which calls for the uneven distribution of man{\textquoteright}s activities among natural resource systems.{\textquotedblright} (from the Abstract). This is a deservedly influential publication.},
	month = {1973, Mar.},
	pages = {94 p.},
	publisher = {Oregon State University},
	organization = {Oregon State University},
	address = {Corvallis, Or.},
	keywords = {ecological values, environmental law and policy, estuaries, estuarine dynamics, habitat conservation, natural resource management, wetland delineation},
	url = {https://repository.library.noaa.gov/view/noaa/16007},
	author = {Bella, David A. and Klingeman, Peter C.}
}
@book {23491,
	title = {Physical and Chemical Oceanographic Data:  Umpqua River Estuary, Oregon; Part IV, April 26-27, 1961},
	year = {1961},
	note = {Oceanographic data collected in the Umpqua River Estuary, Oregon, during the period April 26-27, 1961, are tabulated. Temperature, salinity, velocity, and dissolved oxygen were observed at various depths over one tidal cycle at a mid-channel anchor station located near the mouth of the river.},
	month = {1961, May},
	pages = {25 p.},
	publisher = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	organization = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	address = {Portland, Or.},
	keywords = {estuarine dynamics, hydrology, Lower Umpqua River, salinity data, tidal data, Umpqua River estuary, water temperature data},
	url = {https://ir.library.oregonstate.edu/concern/defaults/mc87pw11h},
	author = {Callaway, Richard J.}
}
@book {23481,
	title = {Physical and Chemical Oceanographic Data : Umpqua River Estuary, Oregon : Part I, December 14-15, 1960},
	year = {1961},
	note = {Oceanographic data collected in the Umpqua River Estuary, Oregon, during the period December 14-15, 1960, are tabulated. Temperature, salinity and velocity were: measured from the surface to the bottom at approximately five-foot intervals at four stations in the estuary. Oxygen samples were collected at depth on four occasions.},
	month = {1961, Jan.},
	pages = {15 p.},
	publisher = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	organization = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	address = {Portland, Or.},
	keywords = {Barrett{\textquoteright}s Landing, Double Cove Point, estuarine dynamics, hydrology, Lower Umpqua River, salinity data, tidal data, Umpqua River estuary, water temperature data, Winchester Bay},
	url = {https://ir.library.oregonstate.edu/concern/defaults/h702qb573},
	author = {Callaway, Richard J.}
}
@book {23486,
	title = {Physical and Chemical Oceanographic Data : Umpqua River Estuary, Oregon : Part II, January 25-26, 1961},
	year = {1961},
	note = {Oceanographic data collected in the Umpqua River Estuary, Oregon, during the period January 25-26, 1961, are tabulated. Temperature, salinity, velocity, and oxygen were observed at various depths over one tidal cycle at one station. Temperature and salinity observations were made from the ocean to 11.5 miles upstream upon completion of the 25-hour station. A brief discussion of results is presented.},
	month = {1961, Feb.},
	pages = {29 p.},
	publisher = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	organization = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	address = {Portland, Or.},
	keywords = {estuarine dynamics, hydrology, Lower Umpqua River, salinity data, tidal data, Umpqua River estuary, water temperature data},
	url = {https://ir.library.oregonstate.edu/concern/defaults/cj82kc88x},
	author = {Callaway, Richard J.}
}
@book {23456,
	title = {Prospectus for an Oceanographical Investigation of the Upmqua River Estuary and Related Studies of the Umpqua River Basin},
	year = {1960},
	note = {Although the Umpqua estuary had little pollution at the time, there were proposals to construct pulp mills on the Umpqua with effluent discharged into the estuary, so it was selected for a proposed study on bay flushing and tidal dynamics.},
	month = {1960, Nov.},
	pages = {24 p.},
	publisher = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	organization = {United States Public Health Service, Water Supply and Pollution Control Program, Region IX},
	address = {Portland, Or.},
	keywords = {estuarine dynamics, salinity, tidal currents, Umpqua River estuary, water temperature},
	url = {https://ir.library.oregonstate.edu/concern/defaults/9s161b55n},
	author = {Callaway, Richard J.}
}
@article {23431,
	title = {Recent studies in the hydrography of Oregon estuaries},
	journal = {Research Briefs.  Fish Commission of Oregon},
	volume = {7},
	number = {1},
	year = {1959},
	note = {Classifies Oregon estuaries based on estuary mixing of salt and fresh water by the per cent change in salinity from the surface of the estuary to the bottom. Good discussion of various types.},
	month = {1959, Jul.},
	pages = {p.14-27},
	keywords = {Alsea River, Coos Bay, estuarine dynamics, hydrology, Nehalem River, Netarts Bay, salinity, Siletz Bay, Siuslaw River, tidal currents, Tillamook Bay, Umpqua River, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/technical_reports/p2676w188},
	author = {Burt, Wayne V. and McAlister, W. Bruce}
}
@book {23376,
	title = {Hydrography of Oregon estuaries : June 1956 to September 1958},
	series = {Data Report (Oregon State College. School of Science)},
	number = {3},
	year = {1958},
	note = {Also called Reference (Oregon State College. School of Science) no. 58-6},
	month = {1958, Oct.},
	pages = {18 p.},
	publisher = {School of Science, Oregon State College},
	organization = {School of Science, Oregon State College},
	address = {Corvallis, Or.},
	keywords = {Alsea River, Barretts Landing, Coos Bay, Dolphin, Double Cove Point, estuarine dynamics, Gardiner, hydrology, Macey Cove, Nehalem River, Netarts Bay, Reedsport, salinity data, Schoolfield Creek, Siletz Bay, Siuslaw River, Steamboat Island, tidal data, Tillamook Bay, Umpqua River, water temperature data, Winchester, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/technical_reports/t722hb284},
	author = {Burt, Wayne V. and McAlister, W. Bruce}
}
@book {23326,
	title = {Hydrography of Oregon estuaries:  prior to June 1956},
	series = {Data Report (Oregon State College. School of Science)},
	number = {2},
	year = {1956},
	note = {Most of the readily available unpublished hydrographic data for Oregon Estuaries which was collected prior to June 1956 have been tabulated, Data on water temperature salinity and velocity are presented.  Also called Reference (Oregon State College. School of Science) no.56-2},
	month = {1956, Jun.},
	publisher = {School of Science, Oregon State College},
	organization = {School of Science, Oregon State College},
	address = {Corvallis, Or.},
	keywords = {Alsea River, Barretts Landing, Coos Bay, Dolphin, Double Cove Point, estuarine dynamics, Gardiner, hydrology, Macey Cove, Nehalem River, Netarts Bay, Reedsport, salinity data, Schoolfield Creek, Siletz Bay, Siuslaw River, Steamboat Island, tidal data, Tillamook Bay, Umpqua River, water temperature data, Winchester, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/technical_reports/vm40xs83p},
	author = {Burt, Wayne V.}
}
